»  2008


Almeida FC, Leszczyniecka M, Fisher PB, Desalle R. 2008. Examining Ancient Inter-domain Horizontal Gene Transfer. Evol Bioinform Online 4:109-19.

Rosenfeld JA, DeSalle R, Lee EK, O'Grady P. 2008. Using whole genome presence/absence data to untangle function in 12 Drosophila genomes. Fly (Austin). 2(6):291-9.

Cibrián-Jaramillo A, Marler TE, DeSalle R, Brenner ED. 2008. Development of EST-microsatellites from the cycad Cycas rumphii, and their use in the recently endangered Cycas micronesica. Conserv Genet 9(4):1051-1054.

Krause J, Unger T, Noçon A, Malaspinas AS, Kolokotronis SO, Stiller M, Soibelzon L, Spriggs H, Dear PH, Briggs AH, Bray SE, O'Brien SJ, Rabeder G, Matheus P, Cooper A, Slatkin M, Pääbo S, Hofreiter M. (2008) Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. BMC Evolutionary Biology 8:220.

Wyatt KB, Campos PF, Gilbert MTP, Kolokotronis S-O, Hynes WH, DeSalle R, Daszak P, MacPhee RD, Greenwood AD. 2008. Historical Mammal Extinction on Christmas Island (Indian Ocean) Correlates with Introduced Infectious Disease. PLoS ONE 3(11):e3602.

DeSalle R, Schierwater B. 2008. An even "newer" animal phylogeny. Bioessays 30(11-12):1043-7.

Naro-Maciel E, Le M, Fitzsimmons NN, Amato G. 2008. Evolutionary relationships of marine turtles: A molecular phylogeny based on nuclear and mitochondrial genes. Mol Phylogenet Evol 49(2):659-662.

Laufer AS, Siddall ME, Graf J. 2008. Characterization of the Digestive-Tract Microbiota of Hirudo orientalis, a European Medicinal Leech. Appl Environ Microbiol 74(19):6151-6154.

Gatesy J, Amato G. 2008. The rapid accumulation of consistent molecular support for intergeneric crocodylian relationships. Mol Phylogenet Evol 48(3):1232-1237.

Almeida FC, Desalle R. 2008. Evidence of adaptive evolution of accessory gland proteins in closely related species of the Drosophila repleta group. Mol Biol Evol 25(9):2043–53.

Rach J, Desalle R, Sarkar IN, Schierwater B, Hadrys H. 2008. Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata. Proc Biol Sci 275(1632):237-247.

Sarkar IN, Egan MG, Coruzzi G, Lee EK, DeSalle R. 2008. Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics. BMC Bioinformatics 9:103.

Martinsen ES, Perkins SL, Schall JJ. 2008. A three-genome phylogeny of malaria parasites (Plasmodium and closely related genera): evolution of life-history traits and host switches. Mol Phylogenet Evol 47(1):261-273.

Baillie GJ, Kolokotronis SO, Waltari E, Maffei JG, Kramer LD, Perkins SL. 2008. Phylogenetic and evolutionary analyses of St. Louis encephalitis virus genomes. Mol Phylogenet Evol 47(2):717-728.

Borda E, Oceguera-Figueroa A, Siddall ME. 2008. On the classification, evolution and biogeography of terrestrial haemadipsoid leeches (Hirudinida: Arhynchobdellida: Hirudiniformes). Mol Phylogenet Evol 46(1):142-154.

Fontanella FM, Feldman CR, Siddall ME, Burbrink FT. 2008. Phylogeography of Diadophis punctatus: extensive lineage diversity and repeated patterns of historical demography in a trans-continental snake. Mol Phylogenet Evol 46(3):1049-1070.

Dunn CW, Hejnol A, Matus DQ, Pang K, Browne WE, Smith SA, Seaver E, Rouse GW, Obst M, Edgecombe GD, Sørensen MV, Haddock SH, Schmidt-Rhaesa A, Okusu A, Kristensen RM, Wheeler WC, Martindale MQ, Giribet G. 2008. Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452(7188):745-749.

Zink R, Barrowclough GF. 2008. Mitochondrial DNA under siege in avian phylogeography. Mol Ecol 17(9):2107-2121.

Mendez M, Rosenbaum HC, Bordino P. 2008. Conservation genetics of the franciscana dolphin in Northern Argentina: population structure, by-catch impacts, and management implications. Conserv Genet 9(2):419-435.

Ji X, Wu X, Yan P, Amato G. 2008. Complete sequence and gene organization of the mitochondrial genome of Siamensis Crocodile (Crocodylus siamensis). Mol Biol Rep 35(2):133-138.

Garcia-España A, Chung PJ, Sarkar IN, Stiner E, Sun TT, Desalle R. 2008. Appearance of new tetraspanin genes during vertebrate evolution. Genomics 91(4):326-334.

O'Grady P, Desalle R. 2008. Out of Hawaii: the origin and biogeography of the genus Scaptomyza (Diptera: Drosophilidae). Biol Lett 4(2):195-199.

Cibrián-Jaramillo A, Hahn WJ, DeSalle R. 2008. Development of microsatellite markers of the Mexican understory palm Chamaedorea elegans, cross-species genotyping, and amplification in congeners. Mol Ecol Notes 8(2):322-324.

Wheeler WC, Pickett KM. 2008. Topology-Bayes versus clade-Bayes in phylogenetic analysis. Mol Biol Evol 25(2):447-453.

Kao HT, Sturgis S, DeSalle R, Tsai J, Davis D, Gruber DF, Pieribone VA. 2008. Dynamic regulation of fluorescent proteins from a single species of coral. Mar Biotechnol 9(6):733-746.