Names cited in Herpetological Monographs
- Class: Amphibia
- Order: Anura Fischer von Waldheim, 1813
- Synonym: Anura Ford and Cannatella, 1993
- Synonym: Bombianura Ford and Cannatella, 1993
- Synonym: Discoglossanura Ford and Cannatella, 1993
- Synonym: Leiopelmatanura Ford and Cannatella, 1993
- Synonym: Mesobatrachia Ford and Cannatella, 1993
- Synonym: Neobatrachia Ford and Cannatella, 1993
- Synonym: Pipanura Ford and Cannatella, 1993
- Synonym: Pipimorpha Ford and Cannatella, 1993
- Family: Aromobatidae
- Family: Bombinatoridae Gray, 1825
- Synonym: Bombinatoridae — Ford and Cannatella, 1993
- Family: Bufonidae
- Family: Centrolenidae
- Family: Craugastoridae
- Subfamily: Craugastorinae
- Genus: Craugastor
- Species: Craugastor amniscola (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus amniscola Campbell and Savage, 2000
- Species: Craugastor catalinae (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus catalinae Campbell and Savage, 2000
- Species: Craugastor charadra (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus charadra Campbell and Savage, 2000
- Species: Craugastor emleni (Dunn and Emlen, 1932)
- Synonym: Eleutherodactylus emleni — Campbell and Savage, 2000
- Species: Craugastor inachus (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus inachus Campbell and Savage, 2000
- Species: Craugastor obesus (Barbour, 1928)
- Synonym: Eleutherodactylus obesus — Campbell and Savage, 2000
- Species: Craugastor palenque (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus palenque Campbell and Savage, 2000
- Species: Craugastor pelorus (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus pelorus Campbell and Savage, 2000
- Species: Craugastor rhyacobatrachus (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus rhyacobatrachus Campbell and Savage, 2000
- Species: Craugastor rivulus (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus rivulus Campbell and Savage, 2000
- Species: Craugastor rupinius (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus rupinius Campbell and Savage, 2000
- Species: Craugastor sabrinus (Campbell and Savage, 2000)
- Synonym: Eleutherodactylus sabrinus Campbell and Savage, 2000
- Subfamily: Holoadeninae
- Genus: Psychrophrynella
- Species: Psychrophrynella ankohuma (Padial and De la Riva, 2007)
- Synonym: Phrynopus ankohuma Padial and De la Riva, 2007
- Species: Psychrophrynella chacaltaya (De la Riva, Padial, and Cortéz, 2007)
- Synonym: Phrynopus chacaltaya De la Riva, Padial, and Cortéz, 2007
- Species: Psychrophrynella condoriri (De la Riva, Aguayo, and Padial, 2007)
- Synonym: Phrynopus condoriri De la Riva, Aguayo, and Padial, 2007
- Species: Psychrophrynella guillei (De la Riva, 2007)
- Synonym: Phrynopus guillei De la Riva, 2007
- Species: Psychrophrynella harveyi (Muńoz, Aguayo, and De la Riva, 2007)
- Synonym: Phrynopus harveyi Muńoz, Aguayo, and De la Riva, 2007
- Species: Psychrophrynella iani (De la Riva, Reichle, and Cortéz, 2007)
- Synonym: Phrynopus iani De la Riva, Reichle, and Cortéz, 2007
- Species: Psychrophrynella illampu (De la Riva, Reichle, and Padial, 2007)
- Synonym: Phrynopus illampu De la Riva, Reichle, and Padial, 2007
- Species: Psychrophrynella illimani (De la Riva and Padial, 2007)
- Synonym: Phrynopus illimani De la Riva and Padial, 2007
- Species: Psychrophrynella kallawaya (De la Riva and Martínez-Solano, 2007)
- Synonym: Phrynopus kallawaya De la Riva and Martínez-Solano, 2007
- Species: Psychrophrynella katantika (De la Riva and Martínez-Solano, 2007)
- Synonym: Phrynopus katantika De la Riva and Martínez-Solano, 2007
- Species: Psychrophrynella quimsacruzis (De la Riva, Reichle, and Bosch, 2007)
- Synonym: Phrynopus quimsacruzis De la Riva, Reichle, and Bosch, 2007
- Species: Psychrophrynella saltator (De la Riva, Reichle, and Bosch, 2007)
- Synonym: Phrynopus saltator De la Riva, Reichle, and Bosch, 2007
- Subfamily: Pristimantinae
- Genus: Pristimantis
- Species: Pristimantis cruciocularis (Lehr, Lundberg, Aguilar, and von May, 2006)
- Synonym: Eleutherodactylus (Eleutherodactylus) cruciocularis Lehr, Lundberg, Aguilar, and von May, 2006
- Species: Pristimantis flavobracatus (Lehr, Lundberg, Aguilar, and von May, 2006)
- Synonym: Eleutherodactylus (Eleutherodactylus) flavobracatus Lehr, Lundberg, Aguilar, and von May, 2006
- Species: Pristimantis huicundo (Guayasamin, Almeida-Reinoso, and Nogales-Sornosa, 2004)
- Synonym: Eleutherodactylus huicundo Guayasamin, Almeida-Reinoso, and Nogales-Sornosa, 2004
- Species: Pristimantis ornatus (Lehr, Lundberg, Aguilar, and von May, 2006)
- Synonym: Eleutherodactylus (Eleutherodactylus) ornatus Lehr, Lundberg, Aguilar, and von May, 2006
- Species: Pristimantis ortizi (Guayasamin, Almeida-Reinoso, and Nogales-Sornosa, 2004)
- Synonym: Eleutherodactylus ortizi Guayasamin, Almeida-Reinoso, and Nogales-Sornosa, 2004
- Species: Pristimantis pardalinus (Lehr, Lundberg, Aguilar, and von May, 2006)
- Synonym: Eleutherodactylus (Eleutherodactylus) pardalinus Lehr, Lundberg, Aguilar, and von May, 2006
- Subfamily: Strabomantinae
- Genus: Yunganastes Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Species: Yunganastes ashkapara (Köhler, 2000)
- Synonym: Eleutherodactylus (Yunganastes) ashkapara — Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Species: Yunganastes bisignatus (Werner, 1899)
- Synonym: Eleutherodactylus (Yunganastes) bisignatus — Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Species: Yunganastes fraudator (Lynch and McDiarmid, 1987)
- Synonym: Eleutherodactylus (Yunganastes) fraudator — Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Species: Yunganastes mercedesae (Lynch and McDiarmid, 1987)
- Synonym: Eleutherodactylus (Yunganastes) mercedesae — Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Species: Yunganastes pluvicanorus (De la Riva and Lynch, 1997)
- Synonym: Eleutherodactylus (Yunganastes) pluvicanorus — Padial, Castroviejo-Fisher, Köhler, Domic, and De la Riva, 2007
- Family: Eleutherodactylidae
- Subfamily: Eleutherodactylinae
- Genus: Eleutherodactylus
- Species: Eleutherodactylus guantanamera Hedges, Estrada, and Thomas, 1992
- Synonym: Eleutherodactylus (Eleutherodactylus) guantanamera Hedges, Estrada, and Thomas, 1992
- Species: Eleutherodactylus ionthus Schwartz, 1960
- Synonym: Eleutherodactylus ionthus — Hedges, Estrada, and Thomas, 1992
- Species: Eleutherodactylus mariposa Hedges, Estrada, and Thomas, 1992
- Synonym: Eleutherodactylus (Eleutherodactylus) mariposa Hedges, Estrada, and Thomas, 1992
- Species: Eleutherodactylus melacara Hedges, Estrada, and Thomas, 1992
- Synonym: Eleutherodactylus (Eleutherodactylus) melacara Hedges, Estrada, and Thomas, 1992
- Family: Hylidae
- Family: Megophryidae Bonaparte, 1850
- Synonym: Megophryidae — Ford and Cannatella, 1993
- Genus: Leptobrachium
- Species: Leptobrachium lumadorum Brown, Siler, Diesmos, and Alcala, 2010
- Species: Leptobrachium mangyanorum Brown, Siler, Diesmos, and Alcala, 2010
- Species: Leptobrachium tagbanorum Brown, Siler, Diesmos, and Alcala, 2010
- Family: Ranidae
- Family: Rhacophoridae
- Subfamily: Buergeriinae
- Subfamily: Rhacophorinae
- Genus: Kurixalus
- Genus: Philautus
- Genus: Rhacophorus
- Species: Rhacophorus achantharrhena Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus angulirostris Ahl, 1927
- Synonym: Rhacohorus angulirostris — Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus barisani Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus bimaculatus (Peters, 1867)
- Synonym: Rhacohorus bimaculatus — Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus catamitus Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus gauni (Inger, 1966)
- Synonym: Rhacohorus gauni — Harvey, Pemberton, and Smith, 2002
- Species: Rhacophorus margaritifer (Schlegel, 1837)
- Synonym: Rhacophorus margaritifer — Harvey, Pemberton, and Smith, 2002
- Order: Caudata
- Family: Plethodontidae
- Subfamily: Hemidactyliinae
- Genus: Batrachoseps
- Species: Batrachoseps gavilanensis Jockusch, Yanev, and Wake, 2001
- Species: Batrachoseps incognitus Jockusch, Yanev, and Wake, 2001
- Species: Batrachoseps luciae Jockusch, Yanev, and Wake, 2001
- Species: Batrachoseps minor Jockusch, Yanev, and Wake, 2001
- Genus: Eurycea
- Species: Eurycea chisholmensis Chippindale, Price, Wiens, and Hillis, 2000
- Species: Eurycea naufragia Chippindale, Price, Wiens, and Hillis, 2000
- Species: Eurycea tonkawae Chippindale, Price, Wiens, and Hillis, 2000
- Genus: Nototriton
- Subfamily: Plethodontinae
- Order: Gymnophiona Müller, 1832
- Synonym: Stegokrotaphia Cannatella and Hillis, 1993
- Family: Caeciliidae Rafinesque, 1814
- Synonym: Caeciliainae — Hedges, Nussbaum, and Maxson, 1993