Names where authority is Bonaparte
- Class: Amphibia Gray, 1825
- Synonym: Batrachi Bonaparte, 1838
- Synonym: Batrachia Bonaparte, 1840
- Synonym: Dipnoa Bonaparte, 1840
- Synonym: Peromela Bonaparte, 1850
- Synonym: Ranae Bonaparte, 1838
- Order: Anura Fischer von Waldheim, 1813
- Incertae Sedis: Arethusa Bonaparte, 1838
- Synonym: Ranae Bonaparte, 1850
- Family: Alytidae Fitzinger, 1843
- Family: Bombinatoridae
- Family: Brevicipitidae Bonaparte, 1850
- Synonym: Brevicipitina Bonaparte, 1850
- Synonym: Engystomidae Bonaparte, 1850
- Family: Bufonidae Gray, 1825
- Synonym: Bufonina — Bonaparte, 1838
- Synonym: Bufonini — Bonaparte, 1835
- Genus: Bufo
- Genus: Bufotes
- Family: Ceratophryidae Tschudi, 1838
- Synonym: Ceratophreidina — Bonaparte, 1850
- Synonym: Ceratophreina — Bonaparte, 1850
- Family: Cycloramphidae Bonaparte, 1850
- Synonym: Cyclorhamphina Bonaparte, 1850
- Family: Dendrobatidae Cope, 1865
- Synonym: Eubaphidae Bonaparte, 1850
- Synonym: Eubaphina — Bonaparte, 1850
- Subfamily: Dendrobatinae Cope, 1865
- Synonym: Eubaphidae Bonaparte, 1850
- Synonym: Eubaphina — Bonaparte, 1850
- Genus: Dendrobates Wagler, 1830
- Synonym: Eubaphus Bonaparte, 1831
- Family: Hylidae Rafinesque, 1815
- Synonym: Hyladina — Bonaparte, 1838
- Synonym: Hylaina — Bonaparte, 1845
- Synonym: Hylidae — Bonaparte, 1850
- Subfamily: Hylinae Rafinesque, 1815
- Synonym: Hyladina — Bonaparte, 1838
- Synonym: Hylaina — Bonaparte, 1845
- Synonym: Hylidae — Bonaparte, 1850
- Family: Leptodactylidae Werner, 1896
- Family: Megophryidae Bonaparte, 1850
- Synonym: Megalophreidina Bonaparte, 1850
- Family: Microhylidae Günther, 1858
- Synonym: Hylaedactylidae — Bonaparte, 1850
- Synonym: Hylaedactylina — Bonaparte, 1850
- Subfamily: Microhylinae Günther, 1858
- Synonym: Hylaedactylidae — Bonaparte, 1850
- Synonym: Hylaedactylina — Bonaparte, 1850
- Family: Myobatrachidae Schlegel, 1850
- Synonym: Myiobatrachidae Bonaparte, 1850
- Synonym: Myiobatrachina — Bonaparte, 1850
- Family: Pelobatidae Bonaparte, 1850
- Synonym: Pelobatina — Bonaparte, 1850
- Family: Pelodytidae Bonaparte, 1850
- Family: Pipidae Gray, 1825
- Synonym: Dactylethrina — Bonaparte, 1850
- Synonym: Pipina — Bonaparte, 1840
- Family: Pyxicephalidae Bonaparte, 1850
- Family: Ranidae Rafinesque, 1814
- Synonym: Ranidae — Bonaparte, 1850
- Synonym: Ranina — Bonaparte, 1832
- Genus: Pelophylax
- Family: Rhinodermatidae Bonaparte, 1850
- Synonym: Rhinodermina Bonaparte, 1850
- Order: Caudata Fischer von Waldheim, 1813
- Synonym: Amphipneusta Bonaparte, 1832
- Synonym: Caducibranchia Bonaparte, 1832
- Synonym: Cryptobranchia Bonaparte, 1832
- Synonym: Ichthyodea Bonaparte, 1840
- Synonym: Ichthyodi Bonaparte, 1838
- Synonym: Icthyoidi Bonaparte, 1839
- Synonym: Mutabilia Bonaparte, 1832
- Synonym: Nullibrachia Bonaparte, 1831
- Synonym: Perennibranchia Bonaparte, 1832
- Synonym: Protei Bonaparte, 1850
- Synonym: Pseudo-salamandrae Bonaparte, 1850
- Synonym: Salamandrae Bonaparte, 1850
- Family: Ambystomatidae Gray, 1850
- Family: Amphiumidae Gray, 1825
- Synonym: Amphiumina — Bonaparte, 1840
- Family: Cryptobranchidae Fitzinger, 1826
- Synonym: Andriadidae — Bonaparte, 1845
- Synonym: Andriadina Bonaparte, 1840
- Synonym: Andriadini Bonaparte, 1839
- Synonym: Andriantidae — Bonaparte, 1850
- Synonym: Andriantina — Bonaparte, 1850
- Synonym: Protonopseidae — Bonaparte, 1850
- Synonym: Protonopseina — Bonaparte, 1850
- Synonym: Protonopsidina — Bonaparte, 1840
- Synonym: Protonopsina Bonaparte, 1840
- Synonym: Sieboldiidae Bonaparte, 1850
- Synonym: Sieboldinae — Bonaparte, 1850
- Family: Hynobiidae Cope, 1859
- Family: Plethodontidae
- Family: Proteidae Gray, 1825
- Synonym: Hypochthonidae — Bonaparte, 1850
- Synonym: Hypochthonina Bonaparte, 1840
- Synonym: Necturidae — Bonaparte, 1850
- Synonym: Necturina Bonaparte, 1845
- Family: Salamandridae Goldfuss, 1820
- Synonym: Bradybatina Bonaparte, 1850
- Synonym: Geotritonidae Bonaparte, 1850
- Synonym: Geotritonina — Bonaparte, 1850
- Synonym: Pleurodelidae — Bonaparte, 1850
- Synonym: Pleurodelina — Bonaparte, 1850
- Synonym: Salamandrina — Bonaparte, 1839
- Synonym: Tritonina Bonaparte, 1850
- Subfamily: Pleurodelinae Tschudi, 1838
- Subfamily: Salamandrinae Goldfuss, 1820
- Synonym: Salamandrina — Bonaparte, 1839
- Genus: Salamandra
- Subfamily: Salamandrininae
- Family: Sirenidae Gray, 1825
- Synonym: Sirenina — Bonaparte, 1840
- Order: Gymnophiona Müller, 1832
- Synonym: Batrachophides Bonaparte, 1831
- Synonym: Batrachophidii Bonaparte, 1832
- Synonym: Batracophidii Bonaparte, 1838
- Synonym: Nuda Bonaparte, 1832
- Synonym: Peromela Bonaparte, 1850
- Family: Caeciliidae Rafinesque, 1814
- Synonym: Caeciliadae — Bonaparte, 1850
- Synonym: Caecilidae — Bonaparte, 1832
- Synonym: Caeciliina Bonaparte, 1850
- Synonym: Caecilina — Bonaparte, 1840
- Family: Ichthyophiidae Taylor, 1968
- Synonym: Epicrina Bonaparte, 1845
- Family: Siphonopidae Bonaparte, 1850
- Synonym: Siphonopina Bonaparte, 1850