SoftLinks

A comprehensive list of evolutionary genetics software applications.

Maintained by Sergios-Orestis KolokotronisEmail me if you think a program should be listed here.

© 2007-2020 Sergios-Orestis Kolokotronis.

Genomes | Alignment | Microsatellites | Molecular Evolution | Phylogeny | Population Genetics

 

Genomes

Drosophila Species Genomes

AAA Drosophila Genomes wiki

BLAST insect genomes @ NCBI

BLAST eukaryotic genomes @ NCBI

BLAST protozoan genomes @ NCBI

UCSC Genome Browser

VISTA Genome Browser

Alignment

 

 

Microsatellites

Descriptive statistics, distances, miscellaneous

 

 

Population Assignment, Gene Flow, Landscape Genetics, Hybrid Zones

 

 

Relatedness, Parentage

 

 

Selection

 

 

Population size [changes], Ne estimation

 

 

Genome Scanning and Detection

 

 

Molecular Evolution

 

 

Phylogeny

 

 

Population Genetics

 

 

Simulations